CH01e09b
Primer features | |||||
Name | Sequence | Length | Tm | ||
CH01e09b.F | CCATCCAACTACTGCCTTTCC | 21 nt | 61.3 °C | ||
CH01e09b.R | TTTGATGAACCCCTTCTTCC | 20 nt | 56.4 °C | ||
SSR info | |||||
SSR repeat type | Compound | ||||
Locus type | presumed single locus | ||||
Detected loci | |||||
Alleles size range | 118-140 | ||||
Number of alleles detected | 5 | ||||
Expected heterozygosity | 0.72 | ||||
PCR annealing temp | 60 | ||||
Sequenced allele size | 136 | ||||
Linkage group(s) | |||||
Developed by | ETH Zuerich | ||||
Other maps | Fiesta x Totem-10 | ||||
Reference publication | Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241 | ||||
Remarks | none | ||||
Sequence | |||||
>CH01e09b AATTAGCAGGAGGTGGCAGTATGTGGTGATGAAAGAGTTTTCCCTACTTAAGCAGTTGACACCTACTGCATTCAAGTAAA TGAGTGAGCTATTTGTTAGCTTGAGTTCGTCCAAGTTGGAAGCTAGAATGGGTTTGCCACGAGGTGGAATAGGTGTCACA CTACTAGACACAAAGCCCTTTGGCTTTGCAAGTAGCAGATTGTTATGGTCCATCCAATATCCATcCAACTACTGCCTTTC CTCTAGTATAAATAGAGATACAGCCTTCATGCTAAAYTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA AGGTAGGGATGAGAAAGGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACATGATTACATTTCTT GTTAATCTGCAGCTTGCAAGGCTTCGGTAATTGGAATTCCAATTACTCCTTCCTTGCCATGAGAGTATCATAGTGGAGCC AAGCCAGCCATGCGCTATAGTATTTGCATTTGCATGACAAAACCCTACCCTACCACTTGTACATATATTTGTGTGTGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTCATGTGTTGTTAGAAGAGCACTCTTTCCCATGTATGAGGGG CCATGGATTTTTCTTTGAGTGAGAGAGAGAGTGAGTGAGTTTTTTCAAGTTAATACAAGAGCACTCTTTTCCATGTGAAA TT | |||||
User's notes | |||||
THERE ARE NO USER'S NOTES. | |||||
Allele size and gel image | |||||
Cultivar | Allele size | ||||
Prima Fiesta Discovery Durello di Forlí TN10-8 Florina Nova Easygro Starking |
138:140 118:120 120 118:138 126:138 138 126:138 |
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