Select a marker

CH01b07
Primer features
Name Sequence Length Tm  
CH01b07.F CCGCGAGATGACAAGTCC 18 nt 58.4 °C Primer Stats
CH01b07.R ATCTTGCAATCTTCTTGCATAGG 23 nt 59.3 °C
SSR info
SSR repeat type Perfect
Locus type presumed single locus
Detected loci
Alleles size range 91-121
Number of alleles detected 5
Expected heterozygosity 0.71
PCR annealing temp 60
Sequenced allele size 106
Linkage group(s)
Developed by ETH Zuerich
Other maps Fiesta x Totem-5 M.27 x M.116-5
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH01b07 aattcgtatcgttggcaactggaatctagttgaggttggataccgctacaagttagaactccttgaaaatgttgatgcag aaatgatcaaccttttgggcttgagcaactccaaatattccacagaaaccattcagatggctaccatatatgcagccaac agtcccggccgcgagatgacaagtccctgcccaatcctggtctctctctctctctctctctctctctctctctctctctc tctcatcatatcctatgcaagaagattgcaagatttgactaacaacattttatcttcccangttaataacgtncccaggg tagttccanccataaaactgcatgatcctccaatatcttttactgcccccttacttcccaatctcatggtcccgaaggct tgaatatctgtccattggaatt
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
99
99:121
99

91:99
107
99
91:97


admin Send comments to Luca Gianfranceschi