Select a marker

CH01e09b
Primer features
Name Sequence Length Tm  
CH01e09b.F CCATCCAACTACTGCCTTTCC 21 nt 61.3 °C Primer Stats
CH01e09b.R TTTGATGAACCCCTTCTTCC 20 nt 56.4 °C
SSR info
SSR repeat type Compound
Locus type presumed single locus
Detected loci
Alleles size range 118-140
Number of alleles detected 5
Expected heterozygosity 0.72
PCR annealing temp 60
Sequenced allele size 136
Linkage group(s)
Developed by ETH Zuerich
Other maps Fiesta x Totem-10
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH01e09b AATTAGCAGGAGGTGGCAGTATGTGGTGATGAAAGAGTTTTCCCTACTTAAGCAGTTGACACCTACTGCATTCAAGTAAA TGAGTGAGCTATTTGTTAGCTTGAGTTCGTCCAAGTTGGAAGCTAGAATGGGTTTGCCACGAGGTGGAATAGGTGTCACA CTACTAGACACAAAGCCCTTTGGCTTTGCAAGTAGCAGATTGTTATGGTCCATCCAATATCCATcCAACTACTGCCTTTC CTCTAGTATAAATAGAGATACAGCCTTCATGCTAAAYTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA AGGTAGGGATGAGAAAGGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACATGATTACATTTCTT GTTAATCTGCAGCTTGCAAGGCTTCGGTAATTGGAATTCCAATTACTCCTTCCTTGCCATGAGAGTATCATAGTGGAGCC AAGCCAGCCATGCGCTATAGTATTTGCATTTGCATGACAAAACCCTACCCTACCACTTGTACATATATTTGTGTGTGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTCATGTGTTGTTAGAAGAGCACTCTTTCCCATGTATGAGGGG CCATGGATTTTTCTTTGAGTGAGAGAGAGAGTGAGTGAGTTTTTTCAAGTTAATACAAGAGCACTCTTTTCCATGTGAAA TT
User's notes
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Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
138:140
118:120
120

118:138
126:138
138
126:138


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