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CH01g12
Primer features
Name Sequence Length Tm  
CH01g12.F CCCACCAATCAAAAATCACC 20 nt 56.4 °C Primer Stats
CH01g12.R TGAAGTATGGTGGTGCGTTC 20 nt 58.4 °C
SSR info
SSR repeat type Imperfect
Locus type single locus
Detected loci
Alleles size range 112-186
Number of alleles detected 6
Expected heterozygosity 0.73
PCR annealing temp 60
Sequenced allele size 181
Linkage group(s)
Developed by ETH Zuerich
Other maps Discovery x TN10-8-12 Fiesta x Discovery-12 Fiesta x A871-14-12 Discovery-12 Fiesta-12 Fiesta x Totem-12 PI 613988-12 Royal Gala-12 Malling9-12 Robusta5-12 Apple Integrated Map-12 M.27 x M.116-12
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH01g12 TTATCAGTGTTGGAAACACTGTTTTTGATAAAGGGATAGATTTTCTAAGTACTTTTCGCT ATGCAAATCTGAAAAACCCTATCCCTTTTCTATTTTAAAGACCATCCCGTGTGCCTTCAA ATCCCTCACAACCAATCAAGTATTTTCCCTCATTTTACTCCCCACCAATCAAAAATCACC CTCACTTCTCTCCCCAATCAGATTTCATTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTTTCTCTCTATCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCATCTTCTC TCTCTCCTCACTCGAACTCTTGAACGCACCACCATACTTCATAGATCGAGCTTAAAAACA CCACCATCACACTCATCTTGAGCTCACGAAACCCAACCATACCAATTGGAATTCCAATTG TGGCAANTGNGTTACACACGCTACCGCTCTGGAATTCTTTTATTTTAGTTTTAGGTCTCT CCCCTATAAAATCAAACC
User's notes
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Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
112:152
112:156
114:152

112:152
112:186
112:184
112


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