Select a marker

CH02b12
Primer features
Name Sequence Length Tm  
CH02b12.F GGCAGGCTTTACGATTATGC 20 nt 58.4 °C Primer Stats
CH02b12.R CCCACTAAAAGTTCACAGGC 20 nt 58.4 °C
SSR info
SSR repeat type Imperfect
Locus type presumed multi-locus
Detected loci
Alleles size range 101-143
Number of alleles detected 13
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 139
Linkage group(s)
Developed by ETH Zuerich
Other maps Discovery-5 Discovery x TN10-8-5 Discovery-5 Fiesta-5 Fiesta-10 Fiesta x Totem-5 Apple Integrated Map-5
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH02b12 aattcgacgagcaggcanntgaccttctcgaagagaagaaatgggttgcttaagaaggctaaggagctatcaatcctttg tgatgctgaggttggattgattgtcttctctagcaccggcaggctttacgattatgctagcactaggttagatctctctc tctctctctctctctctctctctctctctctctctttctctctctcaatcaatctatctatatatgtgtgtatattgcct gtgaacttttagtggggtngagtttgcaatgaaactagagctacttgttcgatatagacacagaatatatatgctgcatg ttctagcaaaatatttgaggtagacttgttatattgtactaatt
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
103:111:129:141
111:127:129
101:109:127:139

125:131
127:141
129:141
141:143


admin Send comments to Luca Gianfranceschi