Select a marker

CH03a04
Primer features
Name Sequence Length Tm  
CH03a04.F GACGCATAACTTCTCTTCCACC 22 nt 62.1 °C Primer Stats
CH03a04.R TCAAGGTGTGCTAGACAAGGAG 22 nt 62.1 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range 92-124
Number of alleles detected 11
Expected heterozygosity 0.89
PCR annealing temp 60
Sequenced allele size 118
Linkage group(s)
Developed by ETH Zuerich
Other maps Discovery-5 Fiesta-5 Fiesta x Totem-5 Apple Integrated Map-5 M.27 x M.116-5
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH03a04 aattgcagacgcataacttctcttccaccactctctctctctctctctctctctctctctctctctctctctctctctac ttcttgtcgtaggtcatcatcgactccttgtctagcacaccttgagctgtagcaagggtanatcagtttttttggcgttg acaataactacaagttatggttggtggccttcttctaaaatacacggtgctcacatgcccctgagataacgacaacatgt ttggtgacacgttcatcattatctaaggagacgagatattctcaaatt
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
96:106
106:114
100:112

92:100
114:120
104:116
96:124


admin Send comments to Luca Gianfranceschi