Select a marker

CH04f03
Primer features
Name Sequence Length Tm  
CH04f03.F CTTGCCCTAGCTTCAAATGC 20 nt 58.4 °C Primer Stats
CH04f03.R TCGATCCGGTTAGGTTTCTG 20 nt 58.4 °C
SSR info
SSR repeat type Imperfect
Locus type presumed single locus
Detected loci
Alleles size range 175-191
Number of alleles detected 4
Expected heterozygosity 0.72
PCR annealing temp 60
Sequenced allele size 192
Linkage group(s)
Developed by ETH Zuerich
Other maps Fiesta x Totem-10 M.27 x M.116-10
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH04f03 aattcaggatttcagtttgtttatctcttgccctagcttcaaatgccagatttctcactctttctcaacaaccaaacaga caataacttcacatgacaactaaataacttgaaacatatataaataagagagagatggagagagagagagagagagagag agagagagagtaccaatgctggtgtgtctgtacatcttcagaaacctaaccggatcgaacggcggtagatcacaaccctt gggcttccatctccacttgagtagttcccgaccgttggatttgccgctggaaatgcaatt
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
185
175:191
175

185:191
187:191
185:191
185:187


admin Send comments to Luca Gianfranceschi