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CH05c06
Primer features
Name Sequence Length Tm  
CH05c06.F ATTGGAACTCTCCGTATTGTGC 22 nt 60.3 °C Primer Stats
CH05c06.R ATCAACAGTAGTGGTAGCCGGT 22 nt 62.1 °C
SSR info
SSR repeat type Imperfect
Locus type single locus
Detected loci
Alleles size range 104-126
Number of alleles detected 8
Expected heterozygosity 0.82
PCR annealing temp 60
Sequenced allele size 122
Linkage group(s)
Developed by ETH Zuerich
Other maps Discovery-16 Fiesta-16 Fiesta x Totem-16 PI 613988-16 Royal Gala-16 Malling9-5 Robusta5-16 Apple Integrated Map-16 M.27 x M.116-16
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH05c06 aatttcatctgcttgtattggaactctccgtattgtgcttagtgtatctcctctctctctctcactctctctctctctct ctctctctctctctctctctctctccagagttgcctaccggctaccactactgttgattgatataaatccaacgccatac ccacaaaagaagtatatatcagtattcacagttaataatcgtagatagtattatggagattccattcttcacgttgcttt gctttctaatcctctccgttttgctaatt
User's notes
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Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
104:110
104:118
106:114

104:126
118:126
118:120
118:126


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