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CN496913-SSR
Primer features
Name Sequence Length Tm  
CN496913-SSR.F TGCCTTTGAGAATCGAAATG 20 nt 54.3 °C Primer Stats
CN496913-SSR.R TGTTTGTCAATTTCTTGGAACTC 23 nt 57.5 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range 236-278
Number of alleles detected 5
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-12
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>gi|46600091|gb|CN496913.1|CN496913 Mdfw2023a24.y1 Mdfw Malus x domestica cDNA clone Mdfw2023a24 5', mRNA sequence AAAAAGATTGCATACTTTCCCGTCAATCTCCTTCAGTACTTCCTTCTTTCGAATTAGATGGGCGAACTGA AGGAGCAAGTTAAGCAAAAAAGCAAGAAAATGAAGAAGGCGTTCATCACACAAGGAGGGAAGGTCGTCGC AATATGCAAGAAAGGATGGTACACTCTTCGAAGATCCGTCTCAAGGTATAAGAAGTGATTGGTATACATA TTATGCCTTTGAGAATCGAAATGTAAAAGTTTTAGATTGTATGCAATGTTGACACTCTGATACAAATACA CCAGCTATTTTTACCGAACGCGTTTGAGAAAATGTCAATTCTTGCTTGAACTAATGATGGTGTATTAATA TATATATATATATATATATATATAGTTGCACCTCATAGATCATCCTTACAAAATATTAACTAAATCGGAA GTATTTAAGGCATCTAATTGAGTTCCAAGAAATTGACAAACACTATGGTCTAAGAAACATTGAAAATTTA TC
User's notes
LucaG (luca.gianfranceschi@unimi.it)
Date 13 February 2006 - Time: 14:16
Untitled Document

Sequence
Title: Mdfw2023a24.y1 Mdfw Malus x domestica cDNA clone Mdfw2023a24 5', mRNA sequence.
Type: mRNA
Length: 492 bp
Organism: Malus x domestica
GenBank Accession: CN496913

Assembly
This sequence was assembled into contig

Library
Name: Mdfw
Cultivar: GoldRush
Tissue:Flower

View Sequence Info at PlantGDB



Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
236
236:242
236:250
236
236
236

236:244

236:244


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