EMPc117
Primer features | |||||
Name | Sequence | Length | Tm | ||
EMPc117.F | GTTCTATCTACCAAGCCACGCT | 22 nt | 62.1 °C | ||
EMPc117.R | CGTTTGTGTGTTTTACGTGTTG | 22 nt | 58.4 °C | ||
SSR info | |||||
SSR repeat type | unknown | ||||
Locus type | |||||
Detected loci | |||||
Alleles size range | 76-119 | ||||
Number of alleles detected | 17 | ||||
Expected heterozygosity | 0.91 | ||||
PCR annealing temp | 0 | ||||
Sequenced allele size | 0 | ||||
Linkage group(s) | |||||
Developed by | East Malling Research (UK) | ||||
Other maps | Fiesta x Totem-7 Robusta5-7 M.27 x M.116-7 | ||||
Reference publication | Fernandez-Fernandez, F; Harvey, NG; James, CM (2006) Isolation and characterization of polymorphic microsatellite markers from European pear (Pyrus communis). Molecular Ecology Notes 6(): 1039?1041 | ||||
Remarks | polymorphic amplification in Malus | ||||
Sequence | |||||
>gi|118402608|emb|AM182398.1| Pyrus communis satellite DNA, clone EMPc117 GGGCCGACGTCGCATGCTCCCGGNCNNCATGGCGGCCGCGGGAATTCGATTCTCTNGCTTACGCGTGGAC TACTTATGGGTGATGAAACTAATAAGTGTCACAGTTAACAGAATCACAGACAAAGTAAACAACAACATCA ACATCCTTCCCAGCCCCAAAGGAGATCAATAATTATGTCATATGTTCTATCTACCAAGCCACGCTGAAAG TAAAATTTAAGTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAATACACAAC ACGTAAAACACACAAACGAAAGACCTAGAAAATAATTAAACAAGACTTTTAGTCGTGGAAAATATTCACA TGCATTGAGATGGTGTTTTCATGGGACTGAATCCAACACAGGGTGACTGGGCGATCGAAGGGGTTTGGTG ATGTGTTGTTGAACAACACAGCTAAACGATCTTGCGAGATGCGATGACGTGGTGAATATCTCTCTTAGAT TTTGNTGATGGGGT | |||||
User's notes | |||||
THERE ARE NO USER'S NOTES. | |||||
Allele size and gel image | |||||
Cultivar | Allele size | ||||
Not available |
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