Select a marker

Hi02a07
Primer features
Name Sequence Length Tm  
Hi02a07.F TTGAAGCTAGCATTTGCCTGT 21 nt 57.4 °C Primer Stats
Hi02a07.R TAGATTGCCCAAAGACTGGG 20 nt 58.4 °C
SSR info
SSR repeat type Imperfect
Locus type single locus
Detected loci
Alleles size range 254-312
Number of alleles detected 4
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Fiesta-2 M.27 x M.116-2
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks extra bands
Sequence
>Hi02A07 CGAACCAACCCATGATTGGTAGATGGTTTGTGATGAGTTATCTGGGTCTT TAACCTTCAATAAATATTTTGAATATGATTGACATGAGCTAGAAACTATG GCAGAAACAAGAAATAACNTTGAAATTCCTAATCATATTATGGCTCCAAG GACCATTGTATTCAGGATCTTTGTTGCTTTCCAATGCTGCACCGTATTCA AGTACTGTTAGTATATCCATACTAGTTTGCAATACCTGTTGAGTAGCTTG TTTAAGCAATTCATCAAGCTGTGGAGTTGAAGCGGCCCAGAATCCCGGGC CGTACACTGCACTGTCAACATTCAAGTAAGCAATAGCCTTTGAAGCTAGC ATTTGCCTGTTTTCTTCTACCCATTCAGTTGATCCTATCTGTAGATAGGG TATAGTTTNAAAGTTCAGAGAGAAACAGAGATAGATAGATATTACACGCA CATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGGGATAGAGACCAGGCCATACTCCTCANGCATCCCAAT TACACAAGACAATTGTACGCCGAGGCTTCCACCCTCTTTTCTGCAGCTTC CCCAGTCTTTGGGCAATCTACATTACACAT
User's notes
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Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
254:282
280
280
312
312
254:312

280

282


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