Select a marker

Hi02c07
Primer features
Name Sequence Length Tm  
Hi02c07.F AGAGCTACGGGGATCCAAAT 20 nt 58.4 °C Primer Stats
Hi02c07.R GTTTAAGCATCCCGATTGAAAGG 23 nt 61.1 °C
SSR info
SSR repeat type Perfect
Locus type presmulti
Detected loci
Alleles size range 108-149
Number of alleles detected 5
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Fiesta-1 Fiesta x Totem-1 Robusta5-1 Royal Gala-1 Apple Integrated Map-1 M.27 x M.116-1
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi02C07 CGAACGGAAGAGCTACGGGGATCCAAATGAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGACTGGAATTTGGGGGTTTGATCTTCT CAGCCGTGTACTCCTTTCAATCGGGATGCTTAGAGAGAGAGAATTAGCGAGAGGATTTGC GGAGCGCGAGAGAGTTGTTTAGAGAGAGAAAGCTAGAGAGAGAGAGAGAGAGGGACAAAG ACAAACTTCACATCGCTGAAGGAGAAATAATTCATTTTCAAAAATTATGAGCGACGCCTC ACGCGCTTCTTTGGCTCGTGGCCGCGGTCTCTCCTTTGATGTGACTGAATAATNTGTAAC CGATTGATATGTATGACAAGTTGCAGCAGCTTCAGCGGTNGCAATTGCTGCGATGAGCCA GATCTGAAACAATCACTAGTGAATTCGCGGTCGCCTGC
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
116:149
108:149
116
116:118
114:118
116:118

108:118

nd


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