Select a marker

Hi07f01
Primer features
Name Sequence Length Tm  
Hi07f01.F GGAGGGCTTTAGTTGGGAAC 20 nt 60.5 °C Primer Stats
Hi07f01.R GTTTGAGCTCCACTTCCAACTCC 23 nt 64.6 °C
SSR info
SSR repeat type Compound
Locus type single locus
Detected loci
Alleles size range 204-220
Number of alleles detected 5
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-12 Fiesta-12 Fiesta x Totem-12 Apple Integrated Map-12 M.27 x M.116-12
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks extra bands
Sequence
>Hi07f01 AACATGATAACTTTGTTGGTACGTAGGAGTTGCATGTGCATGGCGGAGATGCCGACGGAG GAGTGGAGGAGGTGCCATTGGCCTTGGTTGCCGGAGGAGGGACGGAGATCAGTTAATTGG GATGAAGTTATTGGAAGATTGTAGATTATTTGTGAGGTTAAAATTAGGAAGAAAATGTGA ATGTTCATATTGTAGGGGTAGGTCAAAAGATAGAGACGAAGATTTGGAGGGCTTTAGTTG GGAACAACTCGTATAAGTACATATATATATATATGTGTGTGTGTGTGTGTGTGTACGTGT NTGTGTGTGTGTGTGTGGTTTGGTGATGGGAGATTGTGGAGGAGGGTGGTGGATATCTTT GAGAGGGCCGGTGAAGTTTGCAGCTAAAACGGCGGATGCATTCATGGAGTTGGAAGTGGA GCTCAAGAAGTATGATTACTA
User's notes
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Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
204:214
204:210
210:214
206:220
210
210

210:220

206:210


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