Select a marker

Hi08h12
Primer features
Name Sequence Length Tm  
Hi08h12.F GAAGGAAATCATCATCAAGACG 22 nt 58.4 °C Primer Stats
Hi08h12.R GTTTCAAGACCATGGAACAACTTGG 25 nt 64.1 °C
SSR info
SSR repeat type Perfect
Locus type presumed multi-locus
Detected loci
Alleles size range 151-203
Number of alleles detected 6
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-10 Fiesta-10 Malling9-10 Apple Integrated Map-10
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi08h12 CANTANCGACNCTTGGGAAGCTCGGTACCACGCATGCTGCAGACGCGTTACGTATCGGAT CCAGAATTCGTGATTGCGGTACCCGGGAAGCTTGGGATCAAGCTAGCCTCTGCTGGGACT GCGATGTCAAAGTTCACGGCGCAAACTTTCTGGTGGCTAAGCATTCAAGAACTCTGCTCT GCCAAGTCTGCCAATCTCCGACCCCCTGGGTTGGCTCCGGTCTCAAGCTCTGTCCAACTG TTTCCGTTTGCGAGAATTGTGTCAATAATAATGAAGGAAATCATCATCAAGACGAAGAAG AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGACGAGGAAG AAGACGAGGACGAGGACGAGGAGCAGGATGATGGGGATAAAGATGATGATGATGACAACC AAGTTGTTCCATGGTCTTGTAAGCCTCCTCCGCCTGTGTCTTCAAGTTCTTCAAGCAGTA GGGAAGAAGAATGTTCCAGTGGAAGCATGAGCATATCCAGATCCCAAGCTTCCCGGGTAC CGCAATCTGAATTCGTCGACAAGCTTCTCGAGCCTAGGCTAGCTCTAGACCACACGTGTG GGGGCCCGAGCTCGCGGCCGCTGTATTCTATAGTGTCACCTAAATGGCCGCACAATTCAC TGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCC TTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCC CTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGAAATTGTAAGCGTTAATATTTTGTT AAAATTCGCGTTAAATTTTTGTTAAATCAGCTCATTTTTTAACCAATAGGNCGAAATCGG CAAAATCCCTTATAATCAAAANAATANACCGAGATAGGGTTGAGTGTTGTTCCNNTTNGN ACAANAGNCCCTATNAANA
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
157:203
163:169
151:203
169:203
151:203
157:163

169:203

157:172


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