Select a marker

Hi21f08
Primer features
Name Sequence Length Tm  
Hi21f08.F GAGAAAACGCAGAAGCATTG 20 nt 56.4 °C Primer Stats
Hi21f08.R AGTAATGATTTCATCGCGAGTC 22 nt 58.4 °C
SSR info
SSR repeat type Imperfect
Locus type presumed multi-locus
Detected loci
Alleles size range 234-282
Number of alleles detected 10
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Fiesta-10 Apple Integrated Map-6
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi21f08 CGCCACTGAACTTGCTCGCACCCACCATCGCACCAGTCCACGAACCATTTGCTGCAAGTT TTTGTTTGCTTGCACAAATCCCATCCGCTGTAATCCCTTTGTATTTGCGCGGACTGAAGA AATGAAACAATTAAAAAGGGAGAAAACGCAGAAGCATTGCTGCGTTGGAAAAGAAGAAAA GGAAAAGAAAAAAGAAAAAGAAGAAAAGAAAAAGAAAAAAGAAAAAGAAGAAAAGAAAAA GAAGAAAAAGGAAAAAACACGAAAAAAAGGAAAAAAAAAGAAAAAGGAAAAAAAGAGAAA ATCATTGTTTTGTTTTTGAATTGCAGTTTGTTTTTTTTTGTGGCCCACACNCTACAATTA AAATGACTCGCGATGAAATCATTACTGCTCGGACCCGTGCTTCTTGCTATCATCCATCCA ACAATTGTCCTTATTGTGGTTGGAGAGGACATTCCAAAAATCGTTGTTTCNAACTTATTG GCTATCCTGTTAATTGGGACAGACTCGT
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
242:246:280:282
234:244:250:272:282
244:248:272:280:282
242:248:280:282
242:248:266:280
242:250:280

250:266:272:280

244:248:282


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