Select a marker

Hi21g05
Primer features
Name Sequence Length Tm  
Hi21g05.F GACGAGCTCAAGAAGCGAAC 20 nt 60.5 °C Primer Stats
Hi21g05.R GTTTGCTCTTGCCATTTTCTTTCG 24 nt 61.8 °C
SSR info
SSR repeat type Imperfect
Locus type multi-locus
Detected loci
Alleles size range 155-164
Number of alleles detected 3
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-1 Fiesta-15 Fiesta x Totem-1 Apple Integrated Map-1 M.27 x M.116-1
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi21g05 ACATCAGCTACGACGAGCTCAAGAAGCGAACGTGGAAGGATAGTATTCGCTTACAAAAGC TCAACGAGAATCGTAAAATCATTGAGGCAGAAGAAGACGAAGAAGAAGAACTTGCAGAGT CGTCGGCAAACCAAGAAGGGTCTCATCGAAAGAAAATGGCAAGAGCCCAGGATTCGATAC TTAAATACATGGTGAAAATCATGGAGGTATGCAAAGCAAAGGGCTTTGTGTATGGGATTG TGCCTGAGAAGGGAAAGCCAGTGACGGGCTCCTCTGATAGCTTAAGAGAGTGGTGGAAAG ACAAAGCGAGATTTGACCACAACGCCCCCATTGCAATCGCCGAGTACCTGCCAGCTCTGA TATTTGAAGGTGAGTCG
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
158:164
155:158:164
155:158:164
155:158
155
155:158:164

155:158:164

155:158


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