Select a marker

Hi22a07
Primer features
Name Sequence Length Tm  
Hi22a07.F CTCTTCCTTCTCCGCCTCTT 20 nt 60.5 °C Primer Stats
Hi22a07.R GTTTCACTCAGAATGCCTCACAGC 24 nt 65.2 °C
SSR info
SSR repeat type Imperfect
Locus type presumed multi-locus
Detected loci
Alleles size range 153-202
Number of alleles detected 6
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Fiesta-5 Fiesta-10 Malling9-10
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi22a07 CATATCCACTTCAACCCTTCCTTCTAATTCGTCTTCCATATTCTCTTCCTTCTCCGCCTC TTCTTCTTCCGCCTCCGCCTCCTCCGCCTCCTCTTCTTCCTCTTCTTCTTCTAACAATTC GGGGTCTTCTTCTTCTTCTTCTTCTTCTTTTTGTTCCTCGATGTCGGAGCCGGAGAATTC GGCCGGTTCCGGAGATTTGTCATCGGCGCTGTGAGGCATTCTGAGTGCGCGACTGTGTAG GTTGGTACGGTGCGCCTTCGTGCGGAGGTTTTGCGGGGACGCTGANACTCAGAGCTTCCT CACTGGTCTCCGNTGGCTACAGCACTCAAGGCATTTCGGATACGTGGAGTGCTGNGATTA NTCNAGTACAAGAGTC
User's notes
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Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
153:189:192:198
196
189:198
192:202
153:196:202
153:189:202

189:192:196

189:198


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