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CN491050-SSR
Primer features
Name Sequence Length Tm  
CN491050-SSR.F CGCTGATGCGATAATCAATG 20 nt 56.4 °C Primer Stats
CN491050-SSR.R GTTTCACCCACAGAATCACCAGA 23 nt 62.9 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range >330->330
Number of alleles detected 3
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-11
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>gi|46607278|gb|CN491050.1|CN491050 Mdfw2008p11.y1 Mdfw Malus x domestica cDNA clone Mdfw2008p11 5', mRNA sequence CCTTCGCAACCTTCGCAACCTTCCTCCTCATCTTCTTCTCAGCCGCTGACTTTCTTGCACTGGGTTCCTC GTTGGCAGTCTCCGCTGATGCGATAATCAATGGAGAAACGTCTGCACCTTTGAAGAGAGAGAGAGAGAGA GAGAGAGAGAGCAATTGAAGGCAAATTCTTGTCAGAGAAAAACCCATTTCTCTGCAGTCCACCAAAGCAC TTCTCCGCTGAAGCTTCACCTTTCTGCTGATTTTCAGCTTTCCGTTACTGTTTCTTCCGAGATTTATGAA CAAGGATTTCTCTCTGGTGATTCTGTGGGTGAAGTCGGTTTCCTTTCTCCAGTTTTTACTGATTTATCAT CTATGCCATATAATTGTTTGGGAGTTTATTGGAATATAGTGACTATGGGTCCTCTATACACAAAGAAAGT TATCCAGATAAACATAAAAAAGGGAAGTGACTACTTGATTTCCATGGCAACTGGAAGCGGCAAGTCCAAT ATTTGGTACACAAAAATAAGCAGATTTTG
User's notes
LucaG (luca.gianfranceschi@unimi.it)
Date 13 February 2006 - Time: 10:26

Sequence
Title: Mdfw2008p11.y1 Mdfw Malus x domestica cDNA clone Mdfw2008p11 5', mRNA sequence.
Type: mRNA
Length: 519 bp
Organism: Malus x domestica
GenBank Accession: CN491050

Assembly
This sequence was assembled into contig

Library
Name: Mdfw
Cultivar: GoldRush
Tissue:Flower

View Sequence Info at PlantGDB
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
 		>330 c
>330 a/c
>330 (b/c)
nd
nd
>330 c

>330 b

>330 b/c

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