EMPc11
Primer features | |||||
Name | Sequence | Length | Tm | ||
EMPc11.F | GCGATTAAAGATCAATAAACCCATA | 25 nt | 59.2 °C | ||
EMPc11.R | AAGCAGCTGGTTGGTGAAAT | 20 nt | 56.4 °C | ||
SSR info | |||||
SSR repeat type | unknown | ||||
Locus type | |||||
Detected loci | |||||
Alleles size range | 121-161 | ||||
Number of alleles detected | 16 | ||||
Expected heterozygosity | 0.89 | ||||
PCR annealing temp | 0 | ||||
Sequenced allele size | 0 | ||||
Linkage group(s) | |||||
Developed by | East Malling Research (UK) | ||||
Other maps | Fiesta x Totem-11 | ||||
Reference publication | Fernandez-Fernandez, F; Harvey, NG; James, CM (2006) Isolation and characterization of polymorphic microsatellite markers from European pear (Pyrus communis). Molecular Ecology Notes 6(): 1039?1041 | ||||
Remarks | polymorphic amplification in Malus | ||||
Sequence | |||||
>gi|56178075|gb|AY672409.1| Pyrus communis clone EMPc11 microsatellite sequence TTTGTTGCATCACTCTCAACCTTGGCCTTCATAGCGACGTCCAACACCATGTGAAGAGCTTTTCCTTGCA TGCATGGACATGGAGACAGAGGCACGGCCATCTCAATAAGGATCAACAAACACTTAATTACTTCTGCAAA TGTCTCAGAGACTTTTTTTGTTTCTACTTATTTTAATTCTTGTAATATAATCGCGATTAAAGATCAATAA ACCCATAAAAGTTTACTCTGTGTGACATTCAAATTACACACACACACACACACACACACACATATCACTT GATGAGATACAGAATAGGCAGAGAAGTTCAACATATTAGAAACATTTCACCAACCAGCTGCTTTTAGTTG AGTGTTACTTCGTTTCGAAATTCAAAGTTTAAAGCTCCTCCTCCCAATTGATATGAAAAAAAAAAACCCA AGAAGAACGAGAACATTTTGCTTTGAAGGTATGGTATCTGGACTT | |||||
User's notes | |||||
THERE ARE NO USER'S NOTES. | |||||
Allele size and gel image | |||||
Cultivar | Allele size | ||||
Not available |
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