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EMPc11
Primer features
Name Sequence Length Tm  
EMPc11.F GCGATTAAAGATCAATAAACCCATA 25 nt 59.2 °C Primer Stats
EMPc11.R AAGCAGCTGGTTGGTGAAAT 20 nt 56.4 °C
SSR info
SSR repeat type unknown
Locus type
Detected loci
Alleles size range 121-161
Number of alleles detected 16
Expected heterozygosity 0.89
PCR annealing temp 0
Sequenced allele size 0
Linkage group(s)
Developed by East Malling Research (UK)
Other maps Fiesta x Totem-11
Reference publication Fernandez-Fernandez, F; Harvey, NG; James, CM (2006) Isolation and characterization of polymorphic microsatellite markers from European pear (Pyrus communis). Molecular Ecology Notes 6(): 1039?1041
Remarks polymorphic amplification in Malus
Sequence
>gi|56178075|gb|AY672409.1| Pyrus communis clone EMPc11 microsatellite sequence TTTGTTGCATCACTCTCAACCTTGGCCTTCATAGCGACGTCCAACACCATGTGAAGAGCTTTTCCTTGCA TGCATGGACATGGAGACAGAGGCACGGCCATCTCAATAAGGATCAACAAACACTTAATTACTTCTGCAAA TGTCTCAGAGACTTTTTTTGTTTCTACTTATTTTAATTCTTGTAATATAATCGCGATTAAAGATCAATAA ACCCATAAAAGTTTACTCTGTGTGACATTCAAATTACACACACACACACACACACACACACATATCACTT GATGAGATACAGAATAGGCAGAGAAGTTCAACATATTAGAAACATTTCACCAACCAGCTGCTTTTAGTTG AGTGTTACTTCGTTTCGAAATTCAAAGTTTAAAGCTCCTCCTCCCAATTGATATGAAAAAAAAAAACCCA AGAAGAACGAGAACATTTTGCTTTGAAGGTATGGTATCTGGACTT
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Not available


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