Hi01c04
| Primer features | |||||
| Name | Sequence | Length | Tm | ||
| Hi01c04.F | GCTGCCGTTGACGTTAGAG | 19 nt | 59.5 °C |  |
|
| Hi01c04.R | GTTTGTAGAAGTGGCGTTTGAGG | 23 nt | 62.9 °C | ||
| SSR info | |||||
| SSR repeat type | Imperfect | ||||
| Locus type | single locus | ||||
| Detected loci | |||||
| Alleles size range | 214-232 | ||||
| Number of alleles detected | 4 | ||||
| Expected heterozygosity | n.d. | ||||
| PCR annealing temp | 60 | ||||
| Sequenced allele size | 0 | ||||
| Linkage group(s) | |||||
| Developed by | HiDRAS consortium | ||||
| Other maps | Discovery-5 Fiesta-5 Malling9-5 Robusta5-5 | ||||
| Reference publication | Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224 | ||||
| Remarks | clean, compl. band(s) | ||||
| Sequence | |||||
| >Hi01C04 AACAATGCGCGGCTGCCGTTGACGTTAGAGTCTACGCTCCTCTCTCTCCTCTCTCTCCTC TCTCTCTCTCTCTACCGTTTATAAATCCCGTCCTCAAACGCCACTTCTACATCACCGCCC CTCCCTCTGAAATCCTCTCCCTCTCTACGCTCCTCTCTCTCCTCTCTCTTCTCTCTCTTC TCTCTCTCTACCGTTTATAAATCCCCTGTCCTCAAACGCCACTTCTACATCACCACCCCC CCCTCTGAAAATCCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAAAAAGCTCTCT CTCTCTCTCTCTGTGAAAAAGTTAAACTTTAATTGCAATATGCAATCACAAACTATCCCA TATGGAACATGGATTCCGGGCACCCGAGCCGGCCACGCGACGCCGTCCTCACGCGACGCC TCACGTGAGCAACACCTAGCGGCGGCCAGCGTACAAAAAATGGTGTCGGAGAATGCTGTC ACGGTTGTCGGACGACGTGGCTGCTGCATGTGCCACGTCGTCAAGCGGCTGCTCCTCGGT CACGGGGTCAACCCTACGGTTTTCGGCGATGAGCCAGATCTGAAACAAGGGCGAATTCTG CAGATATCCATCACACTGGCGGCCGCTCGAGCATGCATCTAGAGGGCCCAATTCGC | |||||
| User's notes | |||||
| THERE ARE NO USER'S NOTES. | |||||
| Allele size and gel image | |||||
| Cultivar | Allele size |  | |||
|
Fiesta Discovery Gala Florina Nova Easygro TN10-8 Durello di Forli Prima Modial Gala Fuji |
218:222 222:232 218 218 214:232 214:218 218 nd |
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