Select a marker

Hi02d04
Primer features
Name Sequence Length Tm  
Hi02d04.F TGCTGAGTTGGCTAGAAGAGC 21 nt 61.3 °C Primer Stats
Hi02d04.R GTTTAAGTTCGCCAACATCGTCTC 24 nt 63.5 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range 224-250
Number of alleles detected 10
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-10 Fiesta-10 Apple Integrated Map-10
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi02D04 CGAAGAAGCTGCTGAGTTGGCTAGAAGAGCTATCTATCATGCAACATTCCGTGATGGGGC CAGCGGGGGAGTGGCAAGCGGTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCAC ATTCATGACTTTTATTTGTTTTTGAACTGGGGTGTTTTTTATTAGTCTATCACGTGGGGC CAAACGGATGGAAGAAGCTGTCCGGAGACGATGTTGGCGAACTTCACTACCACTATTACC CTGTAGTGGCAGGTTCTGTTTGAGCAAGAAATGGTTGAAGTCTGATGGAAAATGGGAATA CCAACTGTAGGATTTTCATGGCCGATTCTGGG
User's notes
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Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
218:250
226:246
224:244
234
230:240
234:250

240:244

nd


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