Hi03d06
| Primer features | |||||
| Name | Sequence | Length | Tm | ||
| Hi03d06.F | TCATGGATCATTTCGGCTAA | 20 nt | 54.3 °C |  |
|
| Hi03d06.R | GTTTGCCAATTTTATCCAGGTTGC | 24 nt | 61.8 °C | ||
| SSR info | |||||
| SSR repeat type | Perfect | ||||
| Locus type | single locus | ||||
| Detected loci | |||||
| Alleles size range | 115-169 | ||||
| Number of alleles detected | 8 | ||||
| Expected heterozygosity | n.d. | ||||
| PCR annealing temp | 60 | ||||
| Sequenced allele size | 0 | ||||
| Linkage group(s) | |||||
| Developed by | HiDRAS consortium | ||||
| Other maps | Discovery-3 Fiesta x Totem-3 PI 613988-3 Malling9-3 Robusta5-3 Apple Integrated Map-3 M.27 x M.116-3 | ||||
| Reference publication | Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224 | ||||
| Remarks | clean | ||||
| Sequence | |||||
| >Hi03D06 CGATTTCGTTGAGTATTTAAGAAGTTATGAATGTTTAAAATTTACCCAGT TTCCGGCGAGTTTTCCAATTTTCCCGTCCATCAGTCACCTTTCAGGCTAT TTTCCGGCTATCTACCGGCAACCATTGGGCTTCCAAATAGGTATAATCTT GTTCTACACTTTCCTATCTTCATTTTGATATATTATGGGTCAAATTTGGT TAAGAAACGATAGAGTTACAAAGTTTTGAAAATTGCCCAAACTTTCAGCC AAGAGCTCCGGGACACTTAACGGAGTTTTTAACGGAATGACCAAAATAAT AGATGGTGGACAATCTCAGAGACCATTTCTATTGATTTTCAATCTCAGGG ACCAAAGTAATGTGTTTTGCAAATCTCATGGATCATTTCGGCTAAAAAGC CATATACAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG TCAAATGTAGGCTAGAAAAATTGATAGCAACCTGGATAAAATTGGCAGAC CATCTGTAT | |||||
| User's notes | |||||
| THERE ARE NO USER'S NOTES. | |||||
| Allele size and gel image | |||||
| Cultivar | Allele size |  | |||
|
Fiesta Discovery Gala Florina Nova Easygro TN10-8 Durello di Forli Prima Modial Gala Fuji |
117 143:169 117 133:145 145 117:147 117 nd |
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