Select a marker

Hi03e04
Primer features
Name Sequence Length Tm  
Hi03e04.F CTTCACACCGTTTGGACCTC 20 nt 60.5 °C Primer Stats
Hi03e04.R GTTTCATATCCCACCACCACAGAAG 25 nt 65.8 °C
SSR info
SSR repeat type Imperfect
Locus type single locus
Detected loci
Alleles size range 132-160
Number of alleles detected 6
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-13 Fiesta-13 Malling9-13 Robusta5-13 Apple Integrated Map-13 M.27 x M.116-13
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi03E04 CGAAGGTTCCCTGGGACTTTCTTCCCGACTTTTCCTTCCATTTCCATTTTTCTCTCTATG GTCTTCTCTTTTCTCCTTTCCTCATCTGTCACTCTTCCTCTGATTCTTATCCTCCACNTG AAACGTCAAAGACCAAAGCTTAAATATGGTTCTTCACACCGTTTGGACCTCGCAGGCTCG CACGTTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TNTCTCTCCCTTCCTCCACTTCTATTTGGCTTCTGTGGTGGTGGGATATGACGATCAATG GTGAGTTTTTTCATCTGGGTTNTGCCTCATTGNGGATGAATTTTGTCTTTTGCTATGAAA TTTGATTGCGATGAGCCAGATCTGAAACAATCACTAGTGAATTCGCGGCCGCCTGCAGGT CGACCATATGGGAGAGC
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
148:160
132:148
150:160
132
132:150
146

134:160

132


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