Select a marker

Hi04a08
Primer features
Name Sequence Length Tm  
Hi04a08.F TTGAAGGAGTTTCCGGTTTG 20 nt 56.4 °C Primer Stats
Hi04a08.R GTTTCACTCTGTGCTGGATTATGC 24 nt 63.5 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range 211-250
Number of alleles detected 7
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-5 Fiesta-5 PI 613988-5 Royal Gala-5 Malling9-5 Robusta5-5 Apple Integrated Map-5
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi04A08 ACTCTCGCTCCCGGAGCTCCTCAACCAGTCGGAGCAGCTCCGTCACGTCCGGCGGCTTAG GCTGCACCTGCGCGGAGGTGCGTGGGAAGTATACACCAAAGGAGCGCGAGAACACCGCCC CCTTCTGGGGTGTCTTCCCAGAGCTCAACGAAGGCGACGGAGACTTTGAAGGAGTTTCCG GTTTGGGATTCGCCGGCGATTTCTGTAGCCCCATTGCCACCCTCACCTTCCCAGCAACCA TTGCAAAACCCCCTCTCCCTTTCACTCAACACCCTGTTTCTCTCACTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAAGTGTGATGTTCCT CTCTCAAGGATTTGGGGTGTGTGATTAGCTTGCATAATCCAGCACAGAGTGAAGGGGTTA C
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
226:246
216:250
216:226
216:218
212:216
212:216

211:216

nd


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