Select a marker

Hi04c10
Primer features
Name Sequence Length Tm  
Hi04c10.F TGCGCATTTGATAGAGAGAGAA 22 nt 58.4 °C Primer Stats
Hi04c10.R GTTTAACAAAGAACGACCCACCTG 24 nt 63.5 °C
SSR info
SSR repeat type Perfect
Locus type multi-locus
Detected loci
Alleles size range 172-234
Number of alleles detected 10
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-3 Discovery-4 Fiesta-4 Malling9-3 Apple Integrated Map-4 Apple Integrated Map-7 Apple Integrated Map-16
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks dirty
Sequence
>Hi04C10 ATCAATTTCACATACAATTCATAAACCCAATTCAAACATATGCGCATTTG ATAGAGAGAGAAAGTAGAAAGAGAAGAAGAAGAAGAAGAAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGGGAGG AGGGCTCCCATGATGAAAACTGGCCCAATCGCCGAGCACCATCGTGCTCC TGGGTGGAGAAGGCAGGTGGGTCGTCACGCGCTGGAGAGGGGGGGAAGGC AGGTGGGTCGTTCTTTGTTTTGGCTTTCTGGAACTCTGATTTTTCTTAGC AAAATGGTGAAGACCAAGAAATTGAAGAAATGGCAGTGCAGCGAAAGCCC CAGTTGGTGATGGGATTCGATTAGAATCCTTGCAAGCCGTGTATATGCAT TGGGAGTCGTGTACCCGTGCATGTACAAATGCTTCTATCACCCTGCCGAC CAAGGACGAGTTCAAGAGTAATCCAGTAACTCGTGTTTACGTACGTTGGT GGTCAAAGGTATATTATGAGAATTTAGGGACGGCAAGTGGTACCAATTCT TCCCATTCACATCATGATGCGTTAAAAGAGGGTTGTTCTATGGTTCCTAC ACAGTTGGTACCTTTTGATTGTTCG
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
176:206:230
200:228
176:202:234
206:234
206:234
204:234

172:202:234

172:202:234


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