Select a marker

Hi04g05
Primer features
Name Sequence Length Tm  
Hi04g05.F CTGAAACAGGAAACCAATGC 20 nt 56.4 °C Primer Stats
Hi04g05.R GTTTCGTAGAAGCATCGTTGCAG 23 nt 62.9 °C
SSR info
SSR repeat type Perfect
Locus type presumed multi-locus
Detected loci
Alleles size range 190-258
Number of alleles detected 8
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-13 Fiesta x Totem-13 PI 613988-13 Royal Gala-13 Malling9-13 Robusta5-13 Apple Integrated Map-13 M.27 x M.116-13
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi04G05 AGTATGAATTGAGGCTGAAACAGGAAACCAATGCAACTTAAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAGAAACCCTTTGAA TCTACAGTGAGCTACAATACGCGGACTTGTATTCCAGTAAAATTTCTATGAACTACGTTG CCATTTATTTGAAATTTTCAAGAACTTGATCTGCAACGATGCTTCTACGAAGCCACTATA TGGATTACAGCCTATCTTGAGGGGAGTGGTCGTTAGTCGTTACATCTTCTTTTAGCCAGT GGTAAGTTCCTAAACCATGAGCTATTGACGGGGCCAATGAATAATTCATCA
User's notes
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Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
230
190:194:230
230
194:258
232:258
240:254

230

232:248


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