Select a marker

Hi07b02
Primer features
Name Sequence Length Tm  
Hi07b02.F ATTTGGGGTTTCAACAATGG 20 nt 54.3 °C Primer Stats
Hi07b02.R GTTTCGGACATCAAACAAATGTGC 24 nt 61.8 °C
SSR info
SSR repeat type Imperfect
Locus type presumed multi-locus
Detected loci
Alleles size range 212-218
Number of alleles detected 4
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Fiesta-4 Robusta5-4 Apple Integrated Map-4 M.27 x M.116-4 M.27 x M.116-13
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi07b02 GCCGCCAGTGTGATGGATATCTGCNGAATTCGCCCTTGTTTCAGATCTGGCTCANCGCAT TTTAAAATTTGGGGTTTCAACAATGGGAGTACTCTGTGCGTGTGTGTGTGTGTGTGTGTC TGTGCGTGTGTGTGTGTGTGTTTGTGTACTCTGTGTGTGTGTGTGTAATTTCTCCGTGTG TGTGTGTGTTTATGTGTACTCTGTGTGTGTGTGTATTTAGTTGGTGTGTCTCTGTGTGTG TGTGTGTATTCTGCACATTTGTTTGATGTCCGTGTGTGTGTGTATTCTGCACATTTGAAA GGATAGTGTGTGTATGTGTGTATTCTGCACATTTGTCTGATGTCCGTGTGTGTGTGTGTG TGTGTATTCTGCACATTTGTTTTATGTCTGTGTGTGTGTGCATGCGTGTGTGTGTATTCT GCACATTTGAAAGGATAATGTGTGTGTGTGTGTTCTTCATCG
User's notes
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Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
214:218
214
216
212:216
214:216
nd

nd

216


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