Select a marker

Hi11a03
Primer features
Name Sequence Length Tm  
Hi11a03.F GGAATTGGAGCTTGATGCAG 20 nt 58.4 °C Primer Stats
Hi11a03.R GTTTCATACGGAATGGCAAATCG 23 nt 61.1 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range 141-144
Number of alleles detected 2
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-5 Apple Integrated Map-5
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean, compl. band(s)
Sequence
>Hi11a03 ANNANCGACTCCTATAGGGAAAGCTCGGTACCACGCATGCTGCAGACGCGTTACGTATCG GATCCAGAATTCGTGATTGCGGTACCCGGGAAGCTTGGGATCTAGGAAGAAGAAGAAGAA GAAGAAGAAGGAGCAGGCGGAGGTGAGCTTTTGTTGCTGGCTTGGGAATTGGAGCTTGAT GCAGGCTCTCTCTCTGTGTCTGCTATCTCTCACTAGGTTTGTTATCGAGTCAATCTATAT GGTGTGCTGTAGAATGGTCTTGGTGTGTGAGATAACCACCGATTTGCCATTCCGTATGAC TTTCACTTGTTAGTTTTGGATGCCAAGCTTCCCGGGTACCGCAATCTGAATTCGTCGACA AGCTTCTCGAGCCTAGGCTAGCTCTAGACCACACGTGTGGGGGCCCGAGCTCGCGGCCGC TGTATTCTATAGTGTCACCTAAATGGCCGCACAATTCACTGGCCGTCGTTTTACAACGTC GTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCG CCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCC TGAATGGCGAATGGAAATTGTAAGCGTTAATATTTTGTTAAAATTCGCGTTAAATTTTTG TTAAATCAGCTCATTTTTTAACCAATAGGCCGAAATCGGCAAAATCCCTTATAAATCAAA AGAATAGACCGAGATAGGGTTGAGTGTTGTTCCAGTTTGGAACAAGAGTCCACTATTAAA GAACGTGGACTCCAACGTCAAAGGGCGAAAAACCGTCTATCAGGGCGATGGCCCACTACG TGAACCATCACCCTAATCAAGTTTTTTGGGGTCNAGGTGCCGTAAAGCACTAAATCNGAA CCCTAAAGGGANCCCCNATTTAAANCTTGACGGGAAANCCGNNAACNTGNCNAAAANGAA GGNAAAAANCNAANGANCNGNCNCTAGGA
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
141
141:144
141
141
141
141:144

141

141


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