Select a marker

Hi16d02
Primer features
Name Sequence Length Tm  
Hi16d02.F AACCCAACTGCCTCCTTTTC 20 nt 58.4 °C Primer Stats
Hi16d02.R GTTTCGACATGATCTGCCTTG 21 nt 59.4 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range 144-177
Number of alleles detected 5
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-11 Fiesta x Totem-11 Royal Gala-11 M.27 x M.116-11
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi16d02 AACTAAACCCAACTGCCTCCTTTTCCGGGTTTTTCATCATCATCATCATCATCATCATCA CCATCATCTCTTAGACTATCTGAACAAGACGAATGACCAGAACGCCATGAAAATAGTAAC CCCAGCAGCAAGGCAGATCATGTCGAAAGCCTTCTCTCTCCTCTCGTTTCTCTTCCTCCT CTCTCTCTTCATCTCCAAGTACTCCTCCAACCTCGCCTTCCCGTTTATCTCCTTCCTCCT CTTCCCTCCTTCGATCGCCCTCTGCAATATTACCAAGCTCTCCCTCCCGTTCAAATGATT CTCCTCCATGGCCTCCACATGCATGCTCACCTCCCTCACGTGCAGCTCCCCACCTTCGGT CCCCTTGCACGTGACCACCGTACCGCACTGCACATACTCACCCTTCTTCTCCCCCGCCAA TATCGTCGTGAACCGCAGCTGTATTTCCCCCGTCAGCCAGTGCTGCTGCACCGTCACCGG CCTCCGGCTCGACA
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
144
144:147
144:153
144:165
144
144:165

144

144:153


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