Select a marker

Hi21c08
Primer features
Name Sequence Length Tm  
Hi21c08.F TTCTTCTCCTCCACCACCTC 20 nt 60.5 °C Primer Stats
Hi21c08.R GTTTGTCACTGAGAAGGCGGTAGC 24 nt 66.9 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range 227-230
Number of alleles detected 2
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-5 Apple Integrated Map-5
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi21c08 ATTGTTCTTCTCTTCCAATACCACATCCTCAATTTCTCCTTTATTAGCCTTCTCCTCCAC CACAATCTTCCTCGTTTCACCTTCACTCGCCTTCTTCTCCTCCACCACCTCCTTTTCAAT TACACCCTCATCCTTTTTAGATTCACCAGCCTCACCTACATTTTTCACATCCTCCTGGGG ATTTCCTAGCTTTTCTTCTATCGCCATTGTTGAACTTTTCTCATCTCCCTTTTCAACTGC ATTGTTCTTCTTCTGTATTTCATCCTCATTCTTCTTCTTCTTCTTCTCCTCGGCTACCGC CTTCTCAGTGACATCCTCATTCTTTTTAGATTCACCACTTTCCCCAACATTTTTCAAATC CTTTGCTTCATTACCCTTGTCTTGGATATCCTTGGATAACTCTTTTTCTTGTTCTTCANA ATGAGTGACTTTATTATCCTTTCCAGGCTCTTC
User's notes
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Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
230
230:227
230:227
230:227
230:227
230:227

230

nd


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