Select a marker

Hi23g12
Primer features
Name Sequence Length Tm  
Hi23g12.F CCCTTCCCTACCAAATGGAC 20 nt 60.5 °C Primer Stats
Hi23g12.R GTTTAAAGGGGCCCACAAAGTG 22 nt 62.1 °C
SSR info
SSR repeat type Compound
Locus type presumed multi-locus
Detected loci
Alleles size range 223-241
Number of alleles detected 5
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by HiDRAS consortium
Other maps Discovery-8 Fiesta x Totem-8 Fiesta x Totem-15 PI 613988-15 Royal Gala-15 Apple Integrated Map-15 M.27 x M.116-8
Reference publication Silfverberg-Dilworth E, Matasci C L, Van de Weg W E, Van Kaauwen M P W,Walser M, Kodde L P, Soglio V, Gianfranceschi L, Durel C E, Costa F, Yamamoto T, Koller B, Gessler C, Patocchi A (2006) Microsatellite markers spanning the apple (Malus x domestica Borkh) genome. Tree Genetics & Genomes 2(4): 202-224
Remarks clean
Sequence
>Hi23g12 TCAAACATAGAATACAAGCTGGATGGATGAAGTGGAAGAGTGCTTCCGGCGTGTTGTGTA ACCGTCGTAGGCCACTATAGCTCAAGGGAAAATTTTATAGGACGGCAATGAGGCCGGCGA TGCTGTATGGCACAGAATGTTGGACGGTGAAGCATCAACACGTACACAAAATGGGGGCGG TACCCGGGAAGCTTGGGATCAATCAGCCAACAGCAACTTAAAACCCAAGAAACAAAAAAA CACATAAAAATAAAGATATCATCTCTCTCTTCCTCCAAGTCCAAACCCTTCCCTACCAAA TGGACTTATCAAATTTCCAACCCAACAACAACAAGAAGCAGCAGCAGCAGCAGCAGCAAA ACAGCAACACTTCCACTTCCACTTCTAACAACACCACGAGTCTCCACCACCACCATCCTC TTCCTCATCTTCAACAAAAATTCCAACACCACCACCAACAACAACACCCCTCCTCCTCTT CCTCTTATTCTTCTTCTTCTTCTTCCCACTTTGTGGGCCCCTTTGATGGCATCA
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Fiesta
Discovery
Gala
Florina
Nova Easygro
TN10-8
Durello di Forli
Prima
Modial Gala
Fuji
223:241
223:225:241
223:235:241
226:241
226:235:241
223:226:235:241

223:226:235:241

223:235:241


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