Select a marker

IPPN15
Primer features
Name Sequence Length Tm  
IPPN15.F GAAGCACTCAATGGGGAAAA 20 nt 56.4 °C Primer Stats
IPPN15.R (GTTTCTT)AACCATGGCATTGGATTGAT 29 nt 64.8 °C
SSR info
SSR repeat type unknown
Locus type
Detected loci
Alleles size range 182-265
Number of alleles detected 0
Expected heterozygosity MP
PCR annealing temp 60
Sequenced allele size 0
Linkage group(s)
Developed by College of Agriculture, Ibaraki University, Ibaraki, Japan
Other maps Fiesta x Totem-3 M.27 x M.116-3
Reference publication Inoue E., Matsuki Y., Anzai H., Evans K.M. (2007) Isolation and characterization of microsatellite markers in Japanese pear (Pyrus pyrifolia Nakai). Molecular Ecology Notes 7(3): 445-447
Remarks SSR marker developed in pear
Sequence
>gi|125995318|dbj|AB250794.1| Pyrus pyrifolia DNA, microsatellite locus IPPN015 TCTTGCTTACGCGTGGNACTAACATTTGAAGAGAAGCACTCAATGGGGAAAAGAGGTCTCTCTCTTTCTT TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCACATACACACACACACACACACACAC ACACACACGCACACACACAACTGGACACTAATTTGAGCTTGATGAATGTCTATAATTTGCAGATGGGATT GAAATATGGATGTCCGGTAGAAGATGTGATCACAGGGCTATCAATCCAATGCCATGGTTGGAAATCAGTG TATTGCAATCCCACAAGGAAAGCTTTCTTAGGAGTAGCCCCAACTACGCTAACTCAGACGCTTATGCAGC ATAAGAGATGGACAGAAGGCGAGTTCCAAATTTTGTTTACTAAATACAGCCCTGCGTGGTATGCACATGG AAAAATTAGCTTTGGTCTTCAACTTGGATATTGTTGCTTCTGCTTCTGGTGTTCGAATTCCTTGGCAGCG TTATTTTATTCGATTGTCCCTTCCCTTTACCTCCTCAAGGGCATTTCCTTATTTCCACAGGTTAGTCCAC GCGTAAGCAAGA
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Not available


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