IPPN15
Primer features | |||||
Name | Sequence | Length | Tm | ||
IPPN15.F | GAAGCACTCAATGGGGAAAA | 20 nt | 56.4 °C | ||
IPPN15.R | (GTTTCTT)AACCATGGCATTGGATTGAT | 29 nt | 64.8 °C | ||
SSR info | |||||
SSR repeat type | unknown | ||||
Locus type | |||||
Detected loci | |||||
Alleles size range | 182-265 | ||||
Number of alleles detected | 0 | ||||
Expected heterozygosity | MP | ||||
PCR annealing temp | 60 | ||||
Sequenced allele size | 0 | ||||
Linkage group(s) | |||||
Developed by | College of Agriculture, Ibaraki University, Ibaraki, Japan | ||||
Other maps | Fiesta x Totem-3 M.27 x M.116-3 | ||||
Reference publication | Inoue E., Matsuki Y., Anzai H., Evans K.M. (2007) Isolation and characterization of microsatellite markers in Japanese pear (Pyrus pyrifolia Nakai). Molecular Ecology Notes 7(3): 445-447 | ||||
Remarks | SSR marker developed in pear | ||||
Sequence | |||||
>gi|125995318|dbj|AB250794.1| Pyrus pyrifolia DNA, microsatellite locus IPPN015 TCTTGCTTACGCGTGGNACTAACATTTGAAGAGAAGCACTCAATGGGGAAAAGAGGTCTCTCTCTTTCTT TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCACATACACACACACACACACACACAC ACACACACGCACACACACAACTGGACACTAATTTGAGCTTGATGAATGTCTATAATTTGCAGATGGGATT GAAATATGGATGTCCGGTAGAAGATGTGATCACAGGGCTATCAATCCAATGCCATGGTTGGAAATCAGTG TATTGCAATCCCACAAGGAAAGCTTTCTTAGGAGTAGCCCCAACTACGCTAACTCAGACGCTTATGCAGC ATAAGAGATGGACAGAAGGCGAGTTCCAAATTTTGTTTACTAAATACAGCCCTGCGTGGTATGCACATGG AAAAATTAGCTTTGGTCTTCAACTTGGATATTGTTGCTTCTGCTTCTGGTGTTCGAATTCCTTGGCAGCG TTATTTTATTCGATTGTCCCTTCCCTTTACCTCCTCAAGGGCATTTCCTTATTTCCACAGGTTAGTCCAC GCGTAAGCAAGA | |||||
User's notes | |||||
THERE ARE NO USER'S NOTES. | |||||
Allele size and gel image | |||||
Cultivar | Allele size | ||||
Not available |
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