Select a marker

CH02g04
Primer features
Name Sequence Length Tm  
CH02g04.F TTTTACCTTTTTACGTACTTGAGCG 25 nt 60.9 °C Primer Stats
CH02g04.R AGGCAAAACTCTGCAAGTCC 20 nt 58.4 °C
SSR info
SSR repeat type Compound
Locus type single locus
Detected loci
Alleles size range 132-197
Number of alleles detected 7
Expected heterozygosity 0.71
PCR annealing temp 60
Sequenced allele size 198
Linkage group(s)
Developed by ETH Zuerich
Other maps Discovery-17 Fiesta-17 Fiesta x Totem-17 Robusta5-17 TN10-8-17 Robusta5-17 M.27 x M.116-17
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH02g04 aattagatggagggtgatcggagaaatgagaagaacatagcacaggtcagtcagtaaaactgtaagattatggtttgtgg ggaagttaatgaaatgtttttacctttttacgtacttgagcgctcgcgcgcaagagagagagagagagagagagagagag agagagagagagaataagaggtaangggagtgtggctaccgcttgccggggcgactggcggtccccntcttcncagagga gagagatgaatcgaggtnatggagcatgcantcttggacttgcagagttttgcctgtntttttttangtggaanaagatg tgggcttcnacccctttcgaatt
User's notes
THERE ARE NO USER'S NOTES.
Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
187:132
191:197
188:192

192
192
192
192


admin Send comments to Luca Gianfranceschi