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CH04d10
Primer features
Name Sequence Length Tm  
CH04d10.F GAGGCATCTGTAGCTCCGAC 20 nt 62.5 °C Primer Stats
CH04d10.R TGGTGAGTATCTGCTCGCTG 20 nt 60.5 °C
SSR info
SSR repeat type Imperfect
Locus type presumed multi-locus
Detected loci
Alleles size range 138-204
Number of alleles detected 10
Expected heterozygosity n.d.
PCR annealing temp 60
Sequenced allele size 186
Linkage group(s)
Developed by ETH Zuerich
Other maps Fiesta-11 Fiesta x Totem-11 Apple Integrated Map-11
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH04d10 aattgaccacttgaagctggaaatgtaaagcctgaggcatctgtagctccgaccacattcacccggccagttccatcatc ctggtatacaaaatcaaggaaccaccatcaccatcnaagcacaacaatgaacatgtgagagagagagagagagagagagg gagagagagagagagagagagagagagagagagaggtgacagcgagcagatactcaccaaataccagggcacttctttac attctgaaagttagcgaagtataacccatctgccactcacctttctcgttgcgtttcagaaacctttgtgctgcctaaag aagaatcgatatcaaaaatcaccagttaaagaaagcactcaaaatt
User's notes
Luca Gianfranceschi (luca.gianfranceschi@unimi.it)
Date 13 September 2005 - Time: 15:09
Forward primer sequence was wrong. Please use the new one.

Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
141:164:202
150:162
160:160

138:160:204
141:164:186
202:204
162:204


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