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CH04g07
Primer features
Name Sequence Length Tm  
CH04g07.F CCCTAACCTCAATCCCCAAT 20 nt 58.4 °C Primer Stats
CH04g07.R ATGAGGCAGGTGAAGAAGGA 20 nt 58.4 °C
SSR info
SSR repeat type Imperfect
Locus type single locus
Detected loci
Alleles size range 149-211
Number of alleles detected 9
Expected heterozygosity 0.84
PCR annealing temp 60
Sequenced allele size 168
Linkage group(s)
Developed by ETH Zuerich
Other maps Discovery-11 Fiesta-11 Fiesta x Totem-11 Royal Gala-11 Robusta5-11 Apple Integrated Map-11 M.27 x M.116-11
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH04g07 aattgcatgtccccctaacctcaatccccaatcccccaaccaatgtttttccatctcagaaacttctaaaagcctagacg atacggtcatatatagctcgctcgctctctctctctctctctctctctctctctctctctctcaatatgtccacatctga tccttcttcacctgcctcatcgaagtcggaaagtactactgcaggctcttcaagttgtacaagtactactccaagttatt caaatggtttccaagtcggtatctganangcttctggggaanttttttgatgcttcccaatacgacttccgattacaanc agaatggtctgtggtctcctccattacgccggaaggttgtttctttgactcaccccgggaaatattatcatatcgtgttt gttgatgaaaaatgaaanaaatatactgctgcaaacttaaaaatgcccagaatngcttggccanannctcttctctttga tnncngtaatt
User's notes
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Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
151:171
151:175
149:161

169:173
173:175
151:173
151:173


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