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CH05e05
Primer features
Name Sequence Length Tm  
CH05e05.F TCCTAGCGATAGCTTGTGAGAG 22 nt 62.1 °C Primer Stats
CH05e05.R GAAACCACCAAACCGTTACAAT 22 nt 58.4 °C
SSR info
SSR repeat type Perfect
Locus type single locus
Detected loci
Alleles size range 138-160
Number of alleles detected 7
Expected heterozygosity 0.82
PCR annealing temp 60
Sequenced allele size 150
Linkage group(s)
Developed by ETH Zuerich
Other maps Discovery-14 Fiesta-14 Fiesta x Totem-14 Malling9-14 Apple Integrated Map-14
Reference publication Liebhard, R. Gianfranceschi, L. Koller, B. Ryder, C. D. Tarchini, R. Weg, E. van de Gessler, C. (2002) Development and characterization of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding 10(4): 217-241
Remarks none
Sequence
>CH05e05 aattcagttacacagaaaggaggagagagaacagtggagggaggagacagggtcagagttaaagcataaacaaagtcgcg tataataagacgcgcgcaaagcggtctgtaacggcgttttcttctactggatttcctagcgatagcttgtgagagtgttt ttagagagagagagagagagagagagagagagagagagagggtgtgagagttttttgagagagggagggagaaaggcggt tttccgagcagagatagcggtattgtaacggtttggtggtttcggcgttaacggttcttatcgatcagtgatcgttacac gaaatattgtgttgaagcgagaaaaaattggaagttggtgggagctttgtgttgattaaaatccgtattaacggctttat taaggaatt
User's notes
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Allele size and gel image
Cultivar Allele size
Prima
Fiesta
Discovery
Durello di Forlí
TN10-8
Florina
Nova Easygro
Starking
142:160
142:147
140:151

138
142:148
148:160
138:148


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